get_mu_to_optimize.m

function [x]=get_mu_to_optimize(model)
%function [x]=get_mu_to_optimize(model)
%
%Function that gives a vector x with all the parameters to optimize
%i.e. all the parameters with a "1" in model.optimization.params_to_optimize
%
%Required fields of model:
% model.mu_names: field with all the names of the parameters
% model.optimization.params_to_optimize: vector with 0 if the parameter
% should not be optimize and 1 if the parameter should optimized
%
%Output
% x: vector including all the paramteres from the model, that should be
% optimized
%
% Oliver Zeeb 08.06.2010


x=[];
for k=1:length(model.mu_names)
    if model.optimization.params_to_optimize(k) == 1
        x   = [x, model.(model.mu_names{k})];
    end
end